Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_11864274_11865167_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11864274 - 11865167

Intron Length:

894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCAGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTGTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TACATCTTACTT

Flanking Amino Acid:

LCVTEETFVKLCEDHEVLSF

Intron Amino Acid Position:

368

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.7

44.5

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

75.7

0.58

1.1

72.2

42.7

Minor 5ss

39.7

-1.2

3.2

57.4

46.9

Minor BPS

54.8

0.23

1.6

68.99

42.4

Associated Gene:

Gene:

HNRNPLL

Ensembl Gene ID:

ENSAPLG00000013082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018730

11850206 - 11865581

15376

ENSAPLT00000013650

11850206 - 11867161

16956