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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11865226_11865342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11865226 - 11865342

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTATTTTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TGTTTCTTATTT

Flanking Amino Acid:

FIKYKVFDPKPSAKTLSGLL

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

1.2

83.2

30.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

78.9

0.65

75.7

38.1

Minor 5ss

36.4

-1.5

2.7

41.6

38.3

Minor BPS

69.9

0.7

1.5

84.13

Associated Gene:

Gene:

HNRNPLL

Ensembl Gene ID:

ENSAPLG00000013082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018730

11850206 - 11865581

15376

ENSAPLT00000013650

11850206 - 11867161

16956