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Intron Name: Anas_platyrhynchos_platyrhynchos_3_1189302_1194827_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1189302 - 1194827

Intron Length:

5526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GTGTATGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTTAT

U12 Branch Point Sequence:

TAGTAGTTATTT

Flanking Amino Acid:

LKKRRQSNEKENDSGTLDTV

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

1.1

79.9

Major BPS

73.5

0.58

1.2

63.7

43.9

Major PPT

69.6

0.44

62.2

44.1

Minor 5ss

40.2

-1.1

2.7

46.3

Minor BPS

45.3

-0.2

2.3

65.81

Associated Gene:

Gene:

TASP1

Ensembl Gene ID:

ENSAPLG00000011487

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038158

1148624 - 1230576

81953

ENSAPLT00000012059

1148395 - 1230576

82182