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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11910863_11911863_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11910863 - 11911863

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAC

U12 Branch Point Sequence:

CTTCCTTTTACA

Flanking Amino Acid:

MEEIYQKPFQTLMFLIRDWS

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.1

76.2

39.9

Major BPS

69.9

0.5

31.5

Major PPT

88.4

0.86

0.7

25.4

Minor 5ss

41.8

-0.9

3.2

57.8

46.8

Minor BPS

63.1

0.41

1.6

72.64

39.2

Associated Gene:

Gene:

ATL2

Ensembl Gene ID:

ENSAPLG00000013640

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014294

11884971 - 11922142

37172