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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11911957_11912223_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11911957 - 11912223

Intron Length:

267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTATAT

U12 Branch Point Sequence:

TCTATATTAGCA

Flanking Amino Acid:

GKKFLEKRLQVKQNQHEELQ

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

84.2

29.7

Major BPS

66.7

0.41

1.1

63.2

42.8

Major PPT

93.3

0.97

0.6

92.4

17.9

Minor 5ss

40.8

-1

3.1

57.9

46.7

Minor BPS

49.7

-0

1.9

64.91

41.4

Associated Gene:

Gene:

ATL2

Ensembl Gene ID:

ENSAPLG00000013640

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014294

11884971 - 11922142

37172