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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11930134_11930563_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11930134 - 11930563

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCAAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTAAT

U12 Branch Point Sequence:

AGTTGGTTAATC

Flanking Amino Acid:

TRELAVQIQKGLLALGDYMN

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.7

36.4

Major BPS

66.6

0.41

1.4

69.7

44.2

Major PPT

61.9

0.27

1.1

56.4

42.6

Minor 5ss

29.3

-2.4

3.5

46.3

Minor BPS

48.9

-0.1

2.4

65.18

40.8

Associated Gene:

Gene:

EIF4A3

Ensembl Gene ID:

ENSAPLG00000014717

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015383

11925881 - 11933108

7228