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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11947511_11947588_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11947511 - 11947588

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

GCTCTTCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAC

U12 Branch Point Sequence:

CCCGGTGTAACG

Flanking Amino Acid:

GAVRAEPGGCVRSEGGPDGS

Intron Amino Acid Position:

982

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

67.9

37.3

Major BPS

56.8

0.17

1.4

61.4

43.2

Major PPT

0.63

0.8

72.5

32.2

Minor 5ss

31.9

-2.1

3.3

42.4

44.3

Minor BPS

38.2

-1

2.3

37.23

46.1

Associated Gene:

Gene:

SLC8A1

Ensembl Gene ID:

ENSAPLG00000015670

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031245

11947017 - 12053608

106592

ENSAPLT00000016363

11947017 - 12044735

97719