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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12232852_12244867_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12232852 - 12244867

Intron Length:

12016

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCATTACCA

5'SS Class:

weak_major

3'SS Sequence:

CAAAGGAAGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTATGAA

U12 Branch Point Sequence:

TGTTCTGTATGA

Flanking Amino Acid:

EDFETRVIEVKKKSIRALVA

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.3

0.15

1.3

49.1

41.1

Major BPS

57.7

0.19

1.3

51.7

43.9

Major PPT

46.2

-0.2

1.1

32.7

39.9

Minor 5ss

29.8

-2.3

40.2

39.6

Minor BPS

45.3

-0.3

2.4

63.32

43.5

Associated Gene:

Gene:

MRPS5

Ensembl Gene ID:

ENSAPLG00000002557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040180

12225506 - 12255530

30025

ENSAPLT00000002588

12222901 - 12255530

32630

ENSAPLT00000040627

12225629 - 12255530

29902