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Intron Name: Anas_platyrhynchos_platyrhynchos_3_1224126_1225774_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1224126 - 1225774

Intron Length:

1649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TAATCATCAACT

Flanking Amino Acid:

KHVCKRACQKAIEKLQAGAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

38.1

Major BPS

80.4

0.76

80.3

31.8

Major PPT

88.4

0.86

0.7

83.2

Minor 5ss

39.1

-1.2

3.3

58.7

45.8

Minor BPS

62.4

0.47

1.8

80.44

40.4

Associated Gene:

Gene:

TASP1

Ensembl Gene ID:

ENSAPLG00000011487

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038158

1148624 - 1230576

81953

ENSAPLT00000012059

1148395 - 1230576

82182