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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12260603_12260792_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12260603 - 12260792

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

CAGTGTGTAATC

Flanking Amino Acid:

HGGSSSWVTLDAICQVTAAL

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.2

36.5

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

77.9

0.63

0.8

75.9

32.7

Minor 5ss

32.2

-2

3.1

37.6

42.2

Minor BPS

-0.5

2.3

50.15

41.6

Associated Gene:

Gene:

MAL

Ensembl Gene ID:

ENSAPLG00000002880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002911

12260178 - 12261095

918