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Intron Name: Anas_platyrhynchos_platyrhynchos_3_1227727_1230159_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1227727 - 1230159

Intron Length:

2433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTACG

5'SS Class:

major

3'SS Sequence:

GATTTGGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

AAATCCGTATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

69.4

41.2

Major BPS

0.62

1.4

85.7

34.9

Major PPT

69.8

0.45

66.1

44.9

Minor 5ss

38.2

-1.3

2.7

49.6

40.1

Minor BPS

50.4

0.09

2.2

72.7

43.7

Associated Gene:

Gene:

TASP1

Ensembl Gene ID:

ENSAPLG00000011487

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012059

1148395 - 1230576

82182

ENSAPLT00000038158

1148624 - 1230576

81953