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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12296344_12296404_R

Intron Information:

Intron Rank:

129924

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12296344 - 12296404

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGA|GCAGGAGGG

5'SS Class:

weak_major

3'SS Sequence:

GGCAGCAGGTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

GGCTGATAAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.7

0.18

1.3

52.2

41.6

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

38.9

-0.6

1.6

31.8

40.9

Minor 5ss

19.4

-3.5

4.1

24.7

38.3

Minor BPS

43.5

-0.5

2.2

53.83

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043104

12295130 - 12298161

3032