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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12296485_12296584_R

Intron Information:

Intron Rank:

129925

Intron Class:

major

Intron Phase:

Intron Coordinates:

12296485 - 12296584

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCGCT

5'SS Class:

major

3'SS Sequence:

CTCTCCTTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CCTCGCTCACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.3

60.8

44.2

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

80.8

0.69

0.7

75.9

26.1

Minor 5ss

43.4

-0.7

3.5

65.8

45.3

Minor BPS

43.8

-0.3

2.2

61.08

48.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043104

12295130 - 12298161

3032