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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12297859_12297909_R

Intron Information:

Intron Rank:

129929

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12297859 - 12297909

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCCGAGGAG

5'SS Class:

weak_major

3'SS Sequence:

GGAGGAGGAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGAGAA

U12 Branch Point Sequence:

AGGAAGAGAAGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.4

0.06

1.3

44.9

40.1

Major BPS

45.3

-0.2

36.4

31.5

Major PPT

36.5

-0.7

1.6

21.2

35.9

Minor 5ss

11.2

-4.5

3.6

10.2

28.5

Minor BPS

27.8

-1.8

2.1

26.36

34.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043104

12295130 - 12298161

3032