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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12306245_12306737_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12306245 - 12306737

Intron Length:

493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGGG

5'SS Class:

major

3'SS Sequence:

CTCCCGGGGCCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

TCCCCTCTATCT

Flanking Amino Acid:

DLTQTSSSGTVTLPATIMTS

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

60.6

44.2

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

52.5

0.06

1.1

44.9

41.3

Minor 5ss

28.7

-2.4

3.5

38.3

46.7

Minor BPS

47.5

-0.1

1.9

65.58

45.1

Associated Gene:

Gene:

SRF

Ensembl Gene ID:

ENSAPLG00000003320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003395

12304822 - 12313287

8466