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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12306858_12308424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12306858 - 12308424

Intron Length:

1567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATAAAT

U12 Branch Point Sequence:

TCGGGCTGAAGG

Flanking Amino Acid:

QIPTGFTLMSGGTMAQQVPV

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.2

76.2

39.9

Major BPS

56.8

0.17

1.2

65.3

38.6

Major PPT

80.7

0.69

0.7

31.8

Minor 5ss

29.8

-2.3

3.1

41.5

44.9

Minor BPS

41.1

-0.8

2.2

43.2

48.2

Associated Gene:

Gene:

SRF

Ensembl Gene ID:

ENSAPLG00000003320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003395

12304822 - 12313287

8466