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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12308687_12311495_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12308687 - 12311495

Intron Length:

2809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACCCAT

U12 Branch Point Sequence:

TGGCGCTGACCC

Flanking Amino Acid:

SESDSSGETKDALKPAFTVT

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

48.7

-0

1.4

58.4

40.3

Major PPT

78.3

0.64

0.7

25.1

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

43.5

-0.5

2.1

53.46

43.8

Associated Gene:

Gene:

SRF

Ensembl Gene ID:

ENSAPLG00000003320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003395

12304822 - 12313287

8466