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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12316989_12317082_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12316989 - 12317082

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGAGCG

5'SS Class:

major

3'SS Sequence:

CCCTCTGGGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCAGCAT

U12 Branch Point Sequence:

GGTGCCAGCATC

Flanking Amino Acid:

KPQPLSTKHKVSLCTQVALG

Intron Amino Acid Position:

963

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

59.5

39.8

Major BPS

45.4

-0.2

1.4

51.3

42.7

Major PPT

58.6

0.19

1.1

52.4

41.6

Minor 5ss

23.9

-3

3.3

29.6

43.4

Minor BPS

40.4

-0.7

2.1

49.77

40.5

Associated Gene:

Gene:

PTK7

Ensembl Gene ID:

ENSAPLG00000003379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003473

12315599 - 12326603

11005