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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12323775_12324397_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12323775 - 12324397

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAACGGGG

5'SS Class:

major

3'SS Sequence:

CCCGCGTGCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAGAGAC

U12 Branch Point Sequence:

CCCCGCTGAGGT

Flanking Amino Acid:

FEDNPVTNRSKTTVFANGSL

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.2

52.4

44.9

Major BPS

43.7

-0.4

33.8

31.5

Major PPT

57.9

0.18

48.3

39.3

Minor 5ss

35.9

-1.6

3.6

46.1

43.8

Minor BPS

36.5

-0.9

2.1

45.42

45.8

Associated Gene:

Gene:

PTK7

Ensembl Gene ID:

ENSAPLG00000003379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003473

12315599 - 12326603

11005