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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12337589_12337769_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12337589 - 12337769

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCGCCGCTC

5'SS Class:

weak_major

3'SS Sequence:

GATAACCACCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCTAC

U12 Branch Point Sequence:

TTTTCCTGTAGG

Flanking Amino Acid:

MDPEIHITERETILREIGLF

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.5

0.01

1.3

52.5

41.5

Major BPS

63.9

0.35

1.3

64.5

42.5

Major PPT

43.6

-0.3

1.7

36.6

40.2

Minor 5ss

23.6

-3

4.2

32.1

42.9

Minor BPS

52.3

-0

2.2

68.48

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035116

12337439 - 12340067

2629