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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12338108_12339911_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12338108 - 12339911

Intron Length:

1804

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGA|GCGGGGCGG

5'SS Class:

weak_major

3'SS Sequence:

GTGCGTCACCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCGTCAC

U12 Branch Point Sequence:

CGTGCGTCACCA

Flanking Amino Acid:

GGGGGGGGGGGEPLYEVLGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.3

0.01

1.3

41.9

37.3

Major BPS

47.8

-0.1

1.4

44.3

Major PPT

49.6

-0

1.1

45.4

40.9

Minor 5ss

14.3

-4.1

3.7

15.8

30.4

Minor BPS

40.3

-0.7

2.4

51.68

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035116

12337439 - 12340067

2629