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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12340724_12340802_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12340724 - 12340802

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTTCTCATACGT

Flanking Amino Acid:

LHKSSDASFEGTQGLRAESR

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

72.6

32.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

86.6

0.82

0.8

84.6

Minor 5ss

24.1

-3

3.3

43.4

Minor BPS

-0.3

2.1

66.66

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021011

12340634 - 12350705

10072

ENSAPLT00000003653

12340634 - 12350723

10090