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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12340861_12340942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12340861 - 12340942

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGACC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAC

U12 Branch Point Sequence:

ACCAACTGACCC

Flanking Amino Acid:

GNGPLEPRNTSMKRAASLNY

Intron Amino Acid Position:

585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

34.7

Major BPS

64.8

0.37

0.9

55.1

32.8

Major PPT

78.4

0.64

0.8

31.9

Minor 5ss

32.1

-2

3.3

43.2

44.2

Minor BPS

42.6

-0.5

1.8

47.27

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003653

12340634 - 12350723

10090

ENSAPLT00000021011

12340634 - 12350705

10072