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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12341068_12346075_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12341068 - 12346075

Intron Length:

5008

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCGTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAG

U12 Branch Point Sequence:

GTCTCCGTCTCC

Flanking Amino Acid:

EVSMGVEWSGDGSGTLQRSS

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

80.7

33.8

Major BPS

47.4

-0.1

1.6

54.7

43.1

Major PPT

78.2

0.64

0.8

69.1

Minor 5ss

35.6

-1.6

2.6

35.6

40.5

Minor BPS

35.3

-1.1

3.8

58.42

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021011

12340634 - 12350705

10072

ENSAPLT00000003653

12340634 - 12350723

10090