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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12346226_12346925_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12346226 - 12346925

Intron Length:

700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCCCG

5'SS Class:

major

3'SS Sequence:

TTTCTGCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

GCTTCCTTATCC

Flanking Amino Acid:

EECAVRSRRQGIDPINQTKV

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

57.2

47.5

Major BPS

78.8

0.72

67.9

40.1

Major PPT

86.4

0.82

0.8

80.9

31.1

Minor 5ss

43.7

-0.7

2.9

57.5

46.7

Minor BPS

70.3

0.62

1.6

75.09

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021011

12340634 - 12350705

10072

ENSAPLT00000003653

12340634 - 12350723

10090