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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12347180_12347854_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12347180 - 12347854

Intron Length:

675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TCTCACCCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TATCCTCTCACC

Flanking Amino Acid:

HAEEREEMSKSKHRDSAPYA

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.7

83.2

30.8

Major BPS

72.7

0.56

30.1

Major PPT

76.9

0.61

0.8

69.3

31.1

Minor 5ss

32.4

-2

40.7

45.5

Minor BPS

48.7

-0.1

65.81

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021011

12340634 - 12350705

10072

ENSAPLT00000003653

12340634 - 12350723

10090