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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12348834_12349040_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12348834 - 12349040

Intron Length:

207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GTTATCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TTTGTTTCAAAA

Flanking Amino Acid:

EKTLGKDHPAVAATLNNLAV

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

76.1

33.6

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

80.3

0.68

0.9

73.9

36.6

Minor 5ss

32.3

-2

3.3

44.3

43.6

Minor BPS

52.9

0.09

1.7

68.07

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003653

12340634 - 12350723

10090

ENSAPLT00000021011

12340634 - 12350705

10072