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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12349129_12349444_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12349129 - 12349444

Intron Length:

316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCACCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

AAACCCTGAATA

Flanking Amino Acid:

TMLNILALVYRDQNKYKEAA

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

38.2

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

0.52

0.9

66.6

34.2

Minor 5ss

27.4

-2.6

3.5

36.8

47.7

Minor BPS

58.6

0.27

1.4

63.07

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021011

12340634 - 12350705

10072

ENSAPLT00000003653

12340634 - 12350723

10090