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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12367960_12368155_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12367960 - 12368155

Intron Length:

196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCCT

5'SS Class:

strong_major

3'SS Sequence:

CACTGCCCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

ATGTCCTGATGG

Flanking Amino Acid:

TVVTKEKNKKVMFLSKKPKE

Intron Amino Acid Position:

775

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

77.8

36.9

Major BPS

78.8

0.71

67.6

40.6

Major PPT

64.8

0.33

0.9

54.3

36.2

Minor 5ss

36.2

-1.6

3.1

51.2

45.2

Minor BPS

46.8

-0.3

2.1

54.53

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024646

12367064 - 12381335

14272

ENSAPLT00000014351

12367064 - 12382760

15697