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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12368380_12368478_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12368380 - 12368478

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTTGGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTAAT

U12 Branch Point Sequence:

GCTGGGTTAATG

Flanking Amino Acid:

PSVSSGLSGAGSLSPGVEVM

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.6

42.7

Major BPS

66.6

0.41

1.4

69.7

44.2

Major PPT

65.4

0.35

60.1

40.4

Minor 5ss

31.2

-2.2

3.1

31.4

42.6

Minor BPS

42.2

-0.7

2.4

46.98

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024646

12367064 - 12381335

14272

ENSAPLT00000014351

12367064 - 12382760

15697