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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12368621_12368705_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12368621 - 12368705

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CCCCCCTGACCC

Flanking Amino Acid:

GLVEQSFSASVDSDDATACA

Intron Amino Acid Position:

653

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.2

39.6

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

81.2

0.7

73.5

31.5

Minor 5ss

30.5

-2.2

2.8

37.9

39.5

Minor BPS

46.9

-0.2

1.8

52.11

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024646

12367064 - 12381335

14272

ENSAPLT00000014351

12367064 - 12382760

15697