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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12368749_12368825_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12368749 - 12368825

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

CTCGTCTCACCC

Flanking Amino Acid:

SCQKFVPFVGVVKVGLVEQS

Intron Amino Acid Position:

639

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

77.5

32.8

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

81.7

0.71

0.7

76.6

25.3

Minor 5ss

30.4

-2.2

3.2

31.7

42.6

Minor BPS

45.2

-0.3

1.9

53.1

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024646

12367064 - 12381335

14272

ENSAPLT00000014351

12367064 - 12382760

15697