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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12368869_12369510_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12368869 - 12369510

Intron Length:

642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTGCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

GGCCCCTGAGCA

Flanking Amino Acid:

SEAMLTYKQKSPDEDSCQKF

Intron Amino Acid Position:

624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

34.7

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

75.9

0.58

0.9

32.5

Minor 5ss

31.2

-2.2

3.2

38.8

46.5

Minor BPS

48.1

-0.1

1.7

55.92

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024646

12367064 - 12381335

14272

ENSAPLT00000014351

12367064 - 12382760

15697