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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12371249_12371365_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12371249 - 12371365

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGTC

5'SS Class:

strong_major

3'SS Sequence:

GACGCTGTCGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTAAC

U12 Branch Point Sequence:

AGAGCCTAACCT

Flanking Amino Acid:

SSPDSWHSTQVPRKSVYDQL

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.8

76.4

32.8

Major BPS

54.3

0.11

1.2

57.5

37.5

Major PPT

56.9

0.16

49.8

38.9

Minor 5ss

28.3

-2.5

3.6

40.1

46.3

Minor BPS

47.1

-0.1

63.75

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024646

12367064 - 12381335

14272

ENSAPLT00000014351

12367064 - 12382760

15697