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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12372439_12375354_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12372439 - 12375354

Intron Length:

2916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTCT

U12 Branch Point Sequence:

TGTTTCTCTGCA

Flanking Amino Acid:

SVHSTPKPTLRRFFEGVSHS

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

87.7

Major BPS

32.2

-1.1

4.2

57.4

49.1

Major PPT

86.6

0.82

0.7

81.5

30.6

Minor 5ss

32.8

-2

3.3

47.8

47.9

Minor BPS

38.8

-0.8

3.6

64.01

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024646

12367064 - 12381335

14272

ENSAPLT00000014351

12367064 - 12382760

15697