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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12375507_12375838_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12375507 - 12375838

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

AACTCCCTAACT

Flanking Amino Acid:

LLKRFKVTEEVLDSDPVDQT

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

78.7

0.65

0.8

72.6

32.3

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

67.9

0.64

1.7

80.72

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024646

12367064 - 12381335

14272

ENSAPLT00000014351

12367064 - 12382760

15697