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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12375899_12376678_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12375899 - 12376678

Intron Length:

780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAACACCT

5'SS Class:

weak_major

3'SS Sequence:

TGTTTTGTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TTTTGCTGACCG

Flanking Amino Acid:

KMIRTTSMTRQPNFKQKFVA

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.9

0.16

1.2

53.7

43.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

82.4

0.73

0.9

81.2

36.5

Minor 5ss

41.4

-1

3.1

42.8

Minor BPS

50.7

-0.1

2.2

68.08

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024646

12367064 - 12381335

14272

ENSAPLT00000014351

12367064 - 12382760

15697