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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12376760_12377300_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12376760 - 12377300

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TTGCTCTGACGT

Flanking Amino Acid:

EASDDAVQGQDLFDEEDDLR

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

38.2

Major BPS

69.1

0.47

60.7

37.6

Major PPT

74.7

0.56

0.8

68.9

31.6

Minor 5ss

28.6

-2.5

3.5

36.8

47.7

Minor BPS

45.8

-0.2

65.52

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024646

12367064 - 12381335

14272

ENSAPLT00000014351

12367064 - 12382760

15697