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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12377712_12377815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12377712 - 12377815

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGGGT

5'SS Class:

major

3'SS Sequence:

TCTGCCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCACAT

U12 Branch Point Sequence:

ACACCCACATTT

Flanking Amino Acid:

LAVGIINMAEVMQHPTDGGQ

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

43.2

Major BPS

52.8

0.07

1.1

60.5

36.2

Major PPT

69.2

0.43

61.1

40.1

Minor 5ss

29.9

-2.3

3.8

46.9

48.5

Minor BPS

41.4

-0.5

1.9

54.26

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024646

12367064 - 12381335

14272

ENSAPLT00000014351

12367064 - 12382760

15697