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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12409931_12411212_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12409931 - 12411212

Intron Length:

1282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

AGCTCCCTGATG

Flanking Amino Acid:

FGAFACPGTPRMVPPPPISK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

80.6

33.5

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

73.3

0.53

0.9

68.9

31.5

Minor 5ss

-1.8

3.2

48.4

47.4

Minor BPS

49.7

-0.1

1.7

54.25

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036916

12409713 - 12412152

2440