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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12414077_12414288_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12414077 - 12414288

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTTCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTAAA

U12 Branch Point Sequence:

CTTGGGTTAAAG

Flanking Amino Acid:

QGKKPFFLKKSEKRKLELAE

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

82.7

29.2

Major BPS

57.4

0.19

1.3

61.7

43.1

Major PPT

80.8

0.69

0.7

75.9

26.1

Minor 5ss

38.4

-1.3

2.7

48.5

40.3

Minor BPS

42.2

-0.7

2.5

51.73

48.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018940

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037708

12413937 - 12417111

3175

ENSAPLT00000022019

12413937 - 12417111

3175