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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12414577_12414712_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12414577 - 12414712

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGATGCTT

5'SS Class:

major

3'SS Sequence:

CCAGATGATTCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGATGAT

U12 Branch Point Sequence:

TTCTCCAGATGA

Flanking Amino Acid:

LDAIKKQEKEKQLKKCRDAE

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

71.4

39.9

Major BPS

60.7

0.27

1.2

51.5

43.9

Major PPT

58.9

0.2

1.1

54.1

44.6

Minor 5ss

31.3

-2.1

3.5

47.3

48.1

Minor BPS

44.3

-0.4

2.2

61.04

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018940

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037708

12413937 - 12417111

3175