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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12415199_12416950_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12415199 - 12416950

Intron Length:

1752

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCA|GCAACGAAA

5'SS Class:

weak_major

3'SS Sequence:

TTTCCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAA

U12 Branch Point Sequence:

CTCCCTTCAAGT

Flanking Amino Acid:

GKKTAKPAVKQPVEMSAKKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.1

0.03

1.4

54.1

43.5

Major BPS

65.8

0.39

1.1

69.2

36.3

Major PPT

90.5

0.91

0.6

88.7

20.5

Minor 5ss

-2.4

4.1

44.5

44.4

Minor BPS

48.5

-0

1.9

64.98

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018940

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037708

12413937 - 12417111

3175