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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12420365_12422706_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12420365 - 12422706

Intron Length:

2342

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCTGATGCC

5'SS Class:

weak_major

3'SS Sequence:

GTTTGTCAGCGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTCAG

U12 Branch Point Sequence:

CTCGGCAGAAGT

Flanking Amino Acid:

TISRPIVSSQDAHIQSLPAA

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.1

0.1

1.4

39.1

Major BPS

60.9

0.27

1.7

71.4

45.1

Major PPT

47.5

-0.1

1.8

51.3

47.3

Minor 5ss

17.5

-3.8

3.7

Minor BPS

37.5

-0.8

2.2

52.85

47.9

Associated Gene:

Gene:

KLHDC3

Ensembl Gene ID:

ENSAPLG00000013378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013962

12420324 - 12432786

12463