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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12423175_12425432_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12423175 - 12425432

Intron Length:

2258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTGCGTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

TTGGCACCGACT

Flanking Amino Acid:

GDKIILFGGTSPSPEEGMGD

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

33.5

Major BPS

55.9

0.15

1.2

Major PPT

71.8

0.49

0.9

65.1

36.4

Minor 5ss

-1

56.7

47.6

Minor BPS

-0.4

2.2

65.54

44.8

Associated Gene:

Gene:

KLHDC3

Ensembl Gene ID:

ENSAPLG00000013378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029052

12422702 - 12430747

8046

ENSAPLT00000013962

12420324 - 12432786

12463