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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12438281_12438504_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12438281 - 12438504

Intron Length:

224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TCACCGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAC

U12 Branch Point Sequence:

CATGTCACCACT

Flanking Amino Acid:

SSRSSIPMDPEHVELVKRTM

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

66.1

0.4

1.2

69.1

37.9

Major PPT

66.9

0.38

0.9

57.5

38.3

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

40.3

-0.6

2.1

57.53

45.1

Associated Gene:

Gene:

MEA1

Ensembl Gene ID:

ENSAPLG00000002019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002017

12437841 - 12438668

828