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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12442223_12448788_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12442223 - 12448788

Intron Length:

6566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CCTCACTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GTGCCCTCACTC

Flanking Amino Acid:

CTQQYKAEKQNCLSRLQYPM

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

76.8

33.7

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

70.7

0.47

0.8

61.2

34.7

Minor 5ss

31.3

-2.1

2.7

33.6

35.4

Minor BPS

47.6

-0.2

1.8

56.87

41.8

Associated Gene:

Gene:

PPP2R5D

Ensembl Gene ID:

ENSAPLG00000012555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013113

12441612 - 12465445

23834