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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12456245_12457109_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12456245 - 12457109

Intron Length:

865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

GCTGCTCTAATC

Flanking Amino Acid:

VKSLSVYHPQLAYCVVQFLE

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.6

33.8

Major BPS

82.2

0.8

0.9

81.6

Major PPT

86.1

0.81

0.7

81.1

Minor 5ss

29.7

-2.3

40.4

45.3

Minor BPS

49.6

-0

1.8

59.1

40.6

Associated Gene:

Gene:

PPP2R5D

Ensembl Gene ID:

ENSAPLG00000012555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013113

12441612 - 12465445

23834