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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12460491_12460823_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12460491 - 12460823

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGGCGT

5'SS Class:

major

3'SS Sequence:

TTGCTCCCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

GCATTCATACCT

Flanking Amino Acid:

EAIYPEAVIMFSVNLFRTLP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

47.3

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

76.5

0.6

0.8

31.1

Minor 5ss

31.2

-2.1

3.6

45.7

Minor BPS

48.6

-0

1.9

44.3

Associated Gene:

Gene:

PPP2R5D

Ensembl Gene ID:

ENSAPLG00000012555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013113

12441612 - 12465445

23834