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Intron Name: Anas_platyrhynchos_platyrhynchos_3_1248130_1248714_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1248130 - 1248714

Intron Length:

585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

GGTTACTTAAAA

Flanking Amino Acid:

KKELLEDDFQVNVADTRFQA

Intron Amino Acid Position:

733

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

72.3

39.7

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

86.9

0.83

0.8

85.2

29.6

Minor 5ss

40.4

-1.1

3.3

55.5

48.6

Minor BPS

64.3

0.45

1.6

38.9

Associated Gene:

Gene:

ESF1

Ensembl Gene ID:

ENSAPLG00000012113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012639

1244241 - 1277071

32831